Obtaining
isosurfaces of properties other than molecular orbitals
At the moment only cubes of molecular orbitals can be built from
output/checkpoint files using Chemcraft. Properties such as electrostatic
potential can be visualized in the following way:
For Gaussian users: cubes of different values can be built using the
cubegen.exe utility distributed with Gaussian. To use this possibility one
should do the following:
-
Obtain a checkpoint file (.chk), specifying %CHK in input file;
-
Convert it into formatted checkpoint file (.fch) using formchk.exe
utility distributed with Gaussian (Chemcraft can automatically run this
utility when opening checkpoint files);
-
Launch cubegen.exe utility specifying the name of the .fch file. The
input options of cubegen are documented in Gaussian Help file;
-
Open the obtained cube with Chemcraft and use "Show isosurface"
or other option.
For PCGAMESS/Firefly users: a cube file containing data on
electrostatic potential or electron density can be obtained using $CUBE
keyword in input file. For example:
$ELDENS
IEDEN=1 $END
$ELPOT
IEPOT=1 $END
$CUBE
CUBE=.T. mesh=coarse $END
This will produce cube info for both density and ESP in punch file.
You can both open the punch file in Chemcraft or manually extract cube data
(in $CUBE section) from the punch file into a file with .cub extension.
For GAMESS-US users: at the moment we can only suggest using other
programs which support visualization of such properties (e.g. Molden).
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